| Round 1
|
| 1. | River City Warlords | Elvis Andrus |
| 2. | Washington Wild Weasels | Matt Wieters |
| 3. | St. Paul Apostles | Andrew McCutchen |
| 4. | Yankee Fans | Chris Carpenter |
| 5. | Durango Dirtbags | Tommy Hanson |
| 6. | Berlin Bandits | Rick Porcello |
| 7. | Missouri Snappers | Andrew Bailey |
| 8. | Redwing Bulldogs | Ben Zobrist |
| 9. | Adanac Cadavers | Scott Feldman |
| 10. | Palm Harbor Fire | J.A. Happ |
| 11. | Rocky Mountain Maruaders | David Price |
| 12. | Wyoming Cowboys | Brett Anderson |
| 13. | Tuff Beach Warriors, from bem | Gordon Beckham |
| 14. | Jersey City Jolt | Neftali Feliz |
| 15. | Tuff Beach Warriors | Chris Coghlan |
| 16. | West Side Sluggers | Dexter Fowler |
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| Round 2
|
| 17. | River City Warlords | Brad Bergesen |
| 18. | Tuff Beach Warriors, from www | Garrett Jones |
| 19. | St. Paul Apostles | Everth Cabrera |
| 20. | Palm Harbor Fire, from yaf | Rafael Soriano |
| 21. | Durango Dirtbags | Jorge De La Rosa |
| 22. | Berlin Bandits | Alcides Escobar |
| 23. | Missouri Snappers | Drew Stubbs |
| 24. | Redwing Bulldogs | David Aardsma |
| 25. | Adanac Cadavers | Jeff Niemann |
| 26. | Palm Harbor Fire | Kevin Correia |
| 27. | Rocky Mountain Maruaders | Colby Rasmus |
| 28. | Wyoming Cowboys | Mat Latos |
| 29. | Rocky Mountain Maruaders, from bem | Brian Matusz |
| 30. | Jersey City Jolt | Wade Davis |
| 31. | Tuff Beach Warriors | Randy Wells |
| 32. | West Side Sluggers | Nolan Reimold |
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| Bonus Round |
| 33. | St. Paul Apostles | Trevor Cahill |
| 34. | Durango Dirtbags | Casey McGehee |
| 35. | Berlin Bandits | Brian Wilson |
| 36. | Adanac Cadavers | Daniel Bard |
| 37. | Palm Harbor Fire | Ryan Franklin |
| 38. | Rocky Mountain Maruaders | Matt LaPorta |
| 39. | Wyoming Cowboys | Matt Palmer |
| 40. | Bemidji Beavers | Gerardo Parra |
| 41. | Jersey City Jolt | Chris Tillman |
| 42. | West Side Sluggers | Jason Frasor |
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| Round 3
|
| 43. | River City Warlords | Angel Guzman |
| 44. | Washington Wild Weasels | Matt Diaz |
| 45. | St. Paul Apostles | Kyle Blanks |
| 46. | Yankee Fans | Ross Ohlendorf |
| 47. | Durango Dirtbags | Alfredo Aceves |
| 48. | Berlin Bandits | Kenshin Kawakami |
| 49. | Missouri Snappers | Matt Guerrier |
| 50. | Redwing Bulldogs | Darren O'Day |
| 51. | Adanac Cadavers | Brandon Lyon |
| 52. | Palm Harbor Fire | Scott Podsednik |
| 53. | Rocky Mountain Maruaders | Danys Baez |
| 54. | Wyoming Cowboys | Kiko Calero |
| 55. | Bemidji Beavers | Nick Masset |
| 56. | Jersey City Jolt | Luke Gregerson |
| 57. | Tuff Beach Warriors | Brian Sanches |
| 58. | West Side Sluggers | Claudio Vargas |
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| Round 4
|
| 59. | River City Warlords | Rafael Betancourt |
| 60. | Washington Wild Weasels | Alex Avila |
| 61. | St. Paul Apostles | Chris Young |
| 62. | Yankee Fans | Oscar Salazar |
| 63. | Durango Dirtbags | Jake Fox |
| 64. | Berlin Bandits | Brendan Ryan |
| 65. | Missouri Snappers | Lou Marson |
| 66. | Bemidji Beavers, from reb | Sean White |
| 67. | Adanac Cadavers | Kerry Wood |
| 68. | Tuff Beach Warriors, from phw | Angel Pagan |
| 69. | Rocky Mountain Maruaders | Jerry Hairston Jr |
| 70. | Wyoming Cowboys | Adam Kennedy |
| 71. | Bemidji Beavers | Craig Stammen |
| 72. | Jersey City Jolt | Josh Outman |
| 73. | Tuff Beach Warriors | Sean Burnett |
| 74. | West Side Sluggers | Blake Hawksworth |
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| Round 5
|
| 75. | River City Warlords | Dan Meyer |
| 76. | Washington Wild Weasels | Nick Johnson |
| 77. | Tuff Beach Warriors, from spa | Ryan Raburn |
| 78. | Yankee Fans | Tyler Clippard |
| 79. | Jersey City Jolt, from dud | Julio Borbon |
| 80. | Berlin Bandits | David Freese |
| 81. | Missouri Snappers | Marc Rzepczynski |
| 82. | St. Paul Apostles, from reb | Derek Holland |
| 83. | Adanac Cadavers | Ryan Hanigan |
| 84. | Palm Harbor Fire | Gerald Laird |
| 85. | Bemidji Beavers, from rmm | Michael Brantley |
| 86. | Wyoming Cowboys | Robinson Tejeda |
| 87. | Bemidji Beavers | Ronald Belisario |
| 88. | Jersey City Jolt | Omar Infante |
| 89. | Palm Harbor Fire, from tbw | Peter Moylan |
| 90. | Washington Wild Weasels, from wes | Ryan Roberts |
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| Round 6
|
| 91. | River City Warlords | Jason Bulger |
| 92. | Washington Wild Weasels | Joe Thatcher |
| 93. | Tuff Beach Warriors, from spa | Brian Duensing |
| 94. | Yankee Fans | Gabe Kapler |
| 95. | Durango Dirtbags | Omir Santos |
| 96. | Berlin Bandits | Brandon Inge |
| 97. | Missouri Snappers | James McDonald |
| 98. | Redwing Bulldogs | Ben Francisco |
| 99. | Adanac Cadavers | Jordan Zimmermann |
| 100. | Palm Harbor Fire | Craig Counsell |
| 101. | Rocky Mountain Maruaders | Burke Badenhop |
| 102. | Wyoming Cowboys | Ryan Perry |
| 103. | Bemidji Beavers | Scott Olsen |
| 104. | Jersey City Jolt | David Robertson |
| 105. | Bemidji Beavers, from tbw | Trever Miller |
| 106. | West Side Sluggers | Bob Howry |
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| Round 7
|
| 107. | River City Warlords | Jason Varitek |
| 108. | Tuff Beach Warriors, from www | Todd Coffey |
| 109. | St. Paul Apostles | Tommy Hunter |
| 110. | Yankee Fans | Ronny Paulino |
| 111. | Berlin Bandits, from dud | Jose Mijares |
| 112. | Berlin Bandits | Dallas Braden |
| 113. | Missouri Snappers | Ian Desmond |
| 114. | Redwing Bulldogs | Kevin Millwood |
| 115. | Adanac Cadavers | Gregg Zaun |
| 116. | Palm Harbor Fire | Juan Gutierrez |
| 117. | St. Paul Apostles, from rmm | Jeff Fulchino |
| 118. | Wyoming Cowboys | Shawn Camp |
| 119. | Bemidji Beavers | Nick Punto |
| 120. | Jersey City Jolt | Randy Ruiz |
| 121. | Tuff Beach Warriors | Henry Blanco |
| 122. | River City Warlords, from wes | Shairon Martis |
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| Round 8
|
| 123. | River City Warlords | Zach Miner |
| 124. | West Side Sluggers, from www | Andres Torres |
| 125. | St. Paul Apostles | Ramon Troncoso |
| 126. | Yankee Fans | Leo Nunez |
| 127. | Durango Dirtbags | Jhonny Peralta |
| 128. | Berlin Bandits | Chad Durbin |
| 129. | Missouri Snappers | Fu-Te Ni |
| 130. | Redwing Bulldogs | Kyle Lohse |
| 131. | Adanac Cadavers | Reid Brignac |
| 132. | Palm Harbor Fire | Mark Lowe |
| 133. | Rocky Mountain Maruaders | Chris Jakubauskas |
| 134. | Wyoming Cowboys | Ricky Romero |
| 135. | Bemidji Beavers | Eric O'Flaherty |
| 136. | Jersey City Jolt | Franklin Morales |
| 137. | Tuff Beach Warriors | Brandon McCarthy |
| 138. | West Side Sluggers | Fernando Martinez |
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| Round 9
|
| 139. | River City Warlords | Francisco Cervelli |
| 140. | West Side Sluggers, from www | Omar Vizquel |
| 141. | St. Paul Apostles | Oliver Perez |
| 142. | Yankee Fans | Reed Johnson |
| 143. | Durango Dirtbags | Ryan Church |
| 144. | Berlin Bandits | Kevin Jepsen |
| 145. | Missouri Snappers | Mat Gamel |
| 146. | Redwing Bulldogs | Tony Gwynn Jr |
| 147. | Adanac Cadavers | Aaron Laffey |
| 148. | Palm Harbor Fire | Ramon Ramirez |
| 149. | Rocky Mountain Maruaders | Brad Thompson |
| 150. | Wyoming Cowboys | Will Venable |
| 151. | Bemidji Beavers | Brian Tallet |
| 152. | Jersey City Jolt | Travis Hafner |
| 153. | Tuff Beach Warriors | Dustin Nippert |
| 154. | West Side Sluggers | Mitch Stetter |
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| Round 10
|
| 155. | River City Warlords | Ramiro Pena |
| 156. | Washington Wild Weasels | Emilio Bonifacio |
| 157. | St. Paul Apostles | Edward Mujica |
| 158. | Yankee Fans | Jason LaRue |
| 159. | Durango Dirtbags | Jesse Chavez |
| 160. | Berlin Bandits | Brett Cecil |
| 161. | Missouri Snappers | Phil Coke |
| 162. | Redwing Bulldogs | Jim Thome |
| 163. | Adanac Cadavers | Fausto Carmona |
| 164. | Palm Harbor Fire | Micah Hoffpauir |
| 165. | Rocky Mountain Maruaders | Fernando Rodney |
| 166. | Wyoming Cowboys | John Grabow |
| 167. | Bemidji Beavers | Eric Young Jr |
| 168. | Jersey City Jolt | Joel Zumaya |
| 169. | Tuff Beach Warriors | Pedro Martinez |
| 170. | West Side Sluggers | Jose Bautista |
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| Round 11
|
| 171. | River City Warlords | Doug Mathis |
| 172. | Washington Wild Weasels | Clay Condrey |
| 173. | St. Paul Apostles | Chien-Ming Wang |
| 174. | Yankee Fans | Bud Norris |
| 175. | Durango Dirtbags | Shawn Kelley |
| 176. | Berlin Bandits | Chris Getz |
| 177. | Missouri Snappers | Landon Powell |
| 178. | Redwing Bulldogs | Chad Gaudin |
| 179. | Adanac Cadavers | John Mayberry Jr |
| 180. | Palm Harbor Fire | Conor Jackson |
| 181. | Rocky Mountain Maruaders | Jason Hammel |
| 182. | Wyoming Cowboys | Alberto Gonzalez |
| 183. | Bemidji Beavers | Jesse Crain |
| 184. | Jersey City Jolt | Sam Fuld |
| 185. | Tuff Beach Warriors | D.J. Carrasco |
| 186. | West Side Sluggers | Kris Medlen |
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| Round 12
|
| 187. | West Side Sluggers, from riw | Daniel Murphy |
| 188. | Washington Wild Weasels | Jayson Nix |
| 189. | St. Paul Apostles | Nationals Park Washington |
| 190. | Yankee Fans | Brett Tomko |
| 191. | Durango Dirtbags | Dennys Reyes |
| 192. | Berlin Bandits | Mark DiFelice |
| 193. | Missouri Snappers | Leo Rosales |
| 194. | Redwing Bulldogs | Livan Hernandez |
| 195. | Adanac Cadavers | Alex Cora |
| 196. | Palm Harbor Fire | Ryan Spilborghs |
| 197. | Rocky Mountain Maruaders | Jesse Carlson |
| 198. | Wyoming Cowboys | Michael Aubrey |
| 199. | Bemidji Beavers | Brad Lidge |
| 200. | Jersey City Jolt | Jared Burton |
| 201. | Tuff Beach Warriors | Jason Motte |
| 202. | West Side Sluggers | US Cellular Field Chicago WS |
